Corporate Banner
Satellite Banner
Informatics
Scientific Community
 
Become a Member | Sign in
Home>News>This Article
  News
Return

Takeda Selects Genedata Expressionist for Genomic Profiling

Published: Friday, July 13, 2012
Last Updated: Friday, July 13, 2012
Bookmark and Share
Takeda Pharmaceutical expands use of Genedata Expressionist by adding solution for next-generation sequencing data analysis

Genedata, a leading provider of advanced software solutions for drug discovery and life science research, today announced Takeda Pharmaceutical Company expanded its collaboration with Genedata by licensing Genedata Expressionist for Genomic Profiling®. Takeda will use the solution to manage, analyze, and visualize massive amounts of raw data from next-generation sequencing (NGS), microarray, real time-PCR, and other genomic technologies. As an enterprise-level, high-throughput system that can simultaneously analyze thousands of experiments, Genedata Expressionist for Genomic Profiling integrates genomics, transcriptomics, epigenetics, and phenotypic data. Enabling Takeda to trace data and results while promoting standardization and reproducibility of experiments, Genedata Expressionist for Genomic Profiling helps Takeda advance its biomarker discovery projects.
 
"For many years, Takeda has relied on Genedata Expressionist for Mass Spectrometry for our biomarker discovery, and we have enjoyed a long-standing and collaborative relationship with Genedata," noted a Takeda scientist in charge of bioinformatics research. "We searched for a solution to analyze NGS data that could be integrated with our other mass-spectrometry-based omics activities. Genedata Expressionist for Genomic Profiling uniquely handles high-throughput data and its capabilities for interactive genome visualization - essentially a highly-intuitive genome browser - will prove especially valuable to our NGS analysis."

Pharmaceutical companies such as Takeda are using Genedata Expressionist for Genomic Profiling in a range of applications including: personalized medicine; biomarker discovery for predicting drug efficacy and toxicity; characterization of cell lines, xenografts and other model systems; and molecular diagnostics based on genomic and transcriptomic analyses.

Big Data - Easily Handled


Built on open and flexible client-server architecture, Genedata Expressionist for Genomic Profiling thrives on large and complex experimental data sets from all major vendors and technology platforms. It helps to bridge the gap between biology and statistics by making advanced statistical tools, which can analyze the most complex life science data, accessible to a wide range of users. These statistical tools advance the understanding of biological systems and diseases with support for some of the following technologies:

Genomics/DNA-Seq: quantification of SNPs and InDels; chromosome rearrangement and gene fusion; quality control of called variants; annotation of variants with dbSNP or other external sources; functional annotation of variants; and analysis of copy number variations.

Transcriptomics/RNA-Seq: gene, exon, and transcript-level quantification and expression analysis; identification of transcripts, novel genes, and exons; differential expression analysis; and detection of RNA-editing.

Epigenomics/ChIP-Seq/Methyl-Seq: peak detection; annotation of detected peak regions; quantification of DNA methylation from ChIP or bisulfite treated DNA experiments; and identification and annotation of differentially methylated sites.

"Takeda is a leading, global pharmaceutical company with whom we are proud to be expanding our successful and long-term relationship," said Dr. Othmar Pfannes, CEO of Genedata. "This collaboration validates our strategy to position Genedata Expressionist as an integration platform for a number of different omics technologies. Supporting NGS projects is a major focus for Genedata and we are committed to working with innovative companies such as Takeda who are pioneering NGS for improved healthcare."


Further Information

Join For Free

Access to this exclusive content is for Technology Networks Premium members only.

Join Technology Networks Premium for free access to:

  • Exclusive articles
  • Presentations from international conferences
  • Over 3,200+ scientific posters on ePosters
  • More than 4,800+ scientific videos on LabTube
  • 35 community eNewsletters


Sign In



Forgotten your details? Click Here
If you are not a member you can join here

*Please note: By logging into TechnologyNetworks.com you agree to accept the use of cookies. To find out more about the cookies we use and how to delete them, see our privacy policy.

Related Content

Boehringer Ingelheim Chooses Genedata Selector for Cell Line Development and Cell Culture Optimization
Company has announced that the leading pharma company to implement Genedata Selector as its global cell line and genome knowledge management platform.
Thursday, March 10, 2016
Genedata Signs License Agreement with AstraZeneca
Genedata Screener now AstraZeneca’s corporate platform for expediting drug discovery.
Saturday, November 21, 2015
Kymab Implements Genedata Biologics for High-throughput Antibody Discovery
Genedata Biologics™ integrated workflow platform used to increase throughput and automation of Kymab’s transgenic mice-based discovery platforms.
Tuesday, November 17, 2015
Genedata Completes Important Milestone in Collaboration with Bayer Pharma AG
Successful integration of Genedata Profiler™ allows researchers to access, process, analyze and manage petabytes of NGS and other omics data from patients and pre-clinical experiments.
Thursday, September 24, 2015
Merck Serono Chooses Genedata Biologics to Streamline Antibody Discovery Processes
Global deployment of Genedata Biologics across multiple protein therapeutics R&D groups to standardize workflows and improve efficiency.
Thursday, July 23, 2015
Genedata Releases a Breakthrough for Genomic Comparison
Genedata Selector™4.0 provides reference-independent genome sequence comparisons while reducing data processing and analysis time to optimize efficiency and save costs.
Wednesday, July 22, 2015
Genedata Forges Alliance with Intellicyt
Swiss informatics firm Genedata and Intellicyt today announced an alliance to work on cell-based screening in drug discovery.
Thursday, June 18, 2015
Precision Medicine Software Genedata Profiler™ Launched at Bio-IT World
Open, interoperable enterprise platform for patient and compound profiling provides important data management infrastructure for pharma internal R&D processes.
Friday, April 24, 2015
Partner on Innovative Workflow Platform for High-Throughput Cell Line Development
Novel Cell Line Development (CLD) data platform to support the generation and assessment of mammalian production cell lines.
Tuesday, March 17, 2015
Genedata, Bayer Pharma AG Partner on Innovative Workflow Platform for High-Throughput Cell Line Development
Novel Cell Line Development (CLD) data platform to support the generation and assessment of mammalian production cell lines.
Tuesday, March 17, 2015
Genedata Biologics Licensed by Pfizer
Pfizer implements Genedata Biologics to streamline global biopharma R&D processes.
Wednesday, March 04, 2015
Boehringer Ingelheim Selects Genedata Biologics as Antibody Discovery Workflow Platform
Genedata Biologics integrates and streamlines workflows for protein therapeutics R&D groups across multiple Boehringer Ingelheim sites.
Thursday, February 19, 2015
Exploring Innovations in SPR & Combination Screening
Genedata customers will discuss innovations in high content imaging, high throughput screening, compound combination screening, and other related topics at User Group Meetings.
Tuesday, August 26, 2014
GSK Implements Genedata Biologics as Antibody Discovery Platform
Genedata Biologics integrates GlaxoSmithKline's Biopharm Discovery workflows across multiple Biopharm R&D groups and sites
Thursday, June 12, 2014
Genedata Showcases Integrated Analysis & Image Management Solution for Phenotypic Screening
Regardless of instrument or application, Genedata Screener® for High Content Screening enables time-efficient workflow for analysis of high-content experiments
Friday, February 21, 2014
Scientific News
Connectome Map More Than Doubles Human Cortex’s Known Regions
Researchers at NIH have developed software that automatically detects the “fingerprint” of each of these areas in an individual’s brain scans.
Cell Cargo Ships in Near Future?
Virus-inspired container design may lead to cell cargo ships following construction of ten large, two-component, icosahedral protein complexes.
Three-Drug Combinations Counter Antibiotic Resistance
Research shows that combinations of three different antibiotics can treat resistant bacteria, even if they are ineffective independently.
Supercomputing and Drug Discovery
New biotech company uses supercomputer simulations to speed up drug discovery and biotech molecule development.
Identifying Cancer Drug Targets Using 3D-Modelling
Researchers are now able to model genetic mutations manipulation of proteins that can potentially drive cancer.
Human Evolution Driven by Viruses
Study finds surprising percentage of protein adaptions in humans have been driven by viruses.
Earliest Sign of Alzheimer's Development Discovered
Researchers have identified the first physiological signs of late-onset Alzheimer's disease, underlining the importance of computational power in neurology.
Computational Method Offers Significant Boost in Finding New Cancer Targets
MIT and ARIAD Pharmaceuticals team have identified evidence of significant cancer mutations.
Drug Response Predicted by Cancer Cell Lines
Large-scale study could increase success rate of developing personalised cancer treatments.
Google and EI Partner for Next Generation of Coders
The Earlham Institute's open-source project for visualisation of biological data BioJS acts as mentor organisation for Google Summer of Code 2016.
Scroll Up
Scroll Down
SELECTBIO

SELECTBIO Market Reports
Go to LabTube
Go to eposters
 
Access to the latest scientific news
Exclusive articles
Upload and share your posters on ePosters
Latest presentations and webinars
View a library of 1,800+ scientific and medical posters
3,200+ scientific and medical posters
A library of 2,500+ scientific videos on LabTube
4,800+ scientific videos
Close
Premium CrownJOIN TECHNOLOGY NETWORKS PREMIUM FOR FREE!