Corporate Banner
Satellite Banner
Next Gen Sequencing
Scientific Community
 
Join | Sign in
Home>Videos>This Video
  Videos

Return

Next Generation Crop Genomics
SELECTBIO

Assembling a prokaryote genome de novo is now a routine bioinformatics analysis with different technologies, algorithms and strategies currently in use and being developed. In a large extend this is also resolved for more complex animal species. The genomes for some plants, however, remain a challenge. Genomic features such as polyploidy, whole-genome duplications and high repeat content are examples of the complex architecture found in crop species. The advances in sequencing technologies have open up new opportunities to work with complex genomes. Reliable and relatively contiguous assemblies are still required but there is scope for the application of novel approaches that offer access to genetic variants. A fragmented draft assembly still offers a very valuable source of information that could be used for a variety of strategies. We have, for instance, designed exome capture platforms for both barley and wheat. Another example is the identification of trait-linked genes for disease resistance using bulk segregant analysis. I will report on a case study for hexaploid bread wheat in which we have developed tools to analyse RNA-Seq libraries generated from parental wheat lines and six bulks obtained from the backcrossed progeny made of susceptible and resistance plants.

Request more information
Company product page


Access to this article and other content is for registered users.

Join the Technology Networks Community

  • Access to the latest scientific news, products and research through Technology Networks
  • Upload and share your posters on ePosters
  • View a library of 1,800+ scientific and medical posters
  • A library of 3,000+ scientific videos on LabTube


Sign In



Forgotten your details? Click Here
If you already have an account with Technology Networks, please use your existing login details. If you do not yet have an account please join here.

*Please note: By logging into TechnologyNetworks.com you agree to accept the use of cookies. To find out more about the cookies we use and how to delete them, see our privacy policy.

Scientific News
How the Mammoth Got its Wool
Evolutionary change in a gene reconstructed in the lab from the woolly mammoth was part of a suite of adaptations that allowed the mammoth to survive in harsh arctic environments, according to new research.
NuGEN Scientists Screen 400+ Genes for Fusion Events in Single Assay
Breakthrough proves efficacy of new sample preparation method that could accelerate cancer research and development of treatments and diagnostic tests.
More Accurate and Comprehensive Whole Genome Assembly
Scientists from the Icahn School of Medicine at Mount Sinai have developed a new approach to build nearly complete genomes by combining high-throughput DNA sequencing with genome mapping.
Metagenomic Sequencing Unearths Strange New Bacteria From Bioremediation Site
Metagenomic sequencing has unearthed dozens of new bacterial phyla — forming an apparent radiation of miniscule microbes with streamlined genomes, irregular ribosomes, and an apparent inability to produce their own amino acids or nucleotides.
Ebola Sequencing Data Released to Global Research Community Online
To curb further spread of Ebola in Sierra Leone, a team of scientists that is part of an international, multi-organizational effort has released their first dataset of the virus’ genetic structure online.
What Drives Advanced Prostate Cancer?
Large international study finds 90% have anomaly that could influence treatment.
Beyond Average
Researchers have created new platforms to genetically barcode tens of thousands of cells at a time allowing unprecedented detail to be uncovered when studying whole tissue samples.
‘Measuring Stick’ Standard for Gene Sequencing Now Available from NIST
New reference material, NIST RM 8398, to “map” DNA for genetic testing.
Single-cell Analysis Hits its Stride
Advances in technology and computational analysis enable scale and affordability, paving the way for translational studies.
Normal Skin Accrues High Number of Mutations Associated with Cancer
Researchers used genomic sequencing to gain insights into how somatic mutations build up in normal cells before the onset of cancer, a process that is poorly understood.
Skyscraper Banner

SELECTBIO Market Reports
Go to LabTube
Go to eposters