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Molecular dynamics of POPC and POPE lipid membrane bilayers enforced by an intercalated single-wall carbon nanotube
Sergey Shityakov, Thomas Dandekar

In this study, we used high temperature molecular dynamics simulation (400 K), because it is known that critical fluctuations of lipid membranes can even occur at 313 K and especially above 343 K the interlamellar water layer thickness starts to increase non-linearly due to "hydration force". We implemented this method to emphasize POPC and POPE (palmitoyl-oleoyl-phosphatidylethanolamine) membrane bilayer stability enhanced with single-wall carbon nanotube.

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Three-dimensional quantitative structure-activity relationship analysis and ADME predictions of guanylhydrazone coactivator binding inhibitors of estrogen receptors
Sergey Shityakov, Thomas Dandekar

The estrogen receptors (ER) refer to a group of the nuclear hormone receptor superfamily of ligand-mediated transcriptional factors. Over expression of this type of receptors leads to a breast cancer progression. Hormone-responsive breast cancer develops resistance to conventional anti-cancer therapy, and this becomes a major problem in a breast cancer therapy.

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Attempts of facilitated DelF508-CFTR trafficking to the plasma membrane
Sergey Shityakov, Massimo Micaroni, Alexander A. Mironov, Alberto Luini

Cystic fibrosis (CF) is an autosomal recessive disease caused by mutations of the CF transmembrane conductance regulator protein (CFTR), a cAMP-regulated chloride channel. One of the most common CFTR mutations is the deletion of phenylalanine in 508 position (DelF508-CFTR). This mutation induces small conformational change hence the CFTR trafficking is no more effective. The main idea is to find a molecule to facilitate the DelF508-CFTR trafficking to the plasma membrane.

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Regulation of shoot apical meristem development by SEUSS and SEUSS-LIKE 2 in Arabidopsis
Joanne E. Lee and John F. Golz

In Arabidopsis, SEU and SLK2 are redundant components of a regulatory complex that is proposed to promote shoot apical meristem (SAM) formation during embryogenesis. Expression analysis indicates that SEU and SLK2 act upstream of several known SAM regulators, and also regulate auxin accumulation, probably via interaction with auxin response factors.

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Novel Serological Assay Using HIgh-Throughput Chromogenic Microarray Technology for Screening SPF Non-human Primates
Justin Brink, Audra Hachey, Keith Mansfield, Kim Luke

Routine surveillance programs to detect microbial agents in non-human primate colonies are critical to maintaining colony health and safety, as well as research integrity. Serological testing is a crucial element of maintaining colony health, but current methods rely on slow, expensive, and low-throughput ELISA-based serological assays. Here we describe the development of a sensitive, specific, robust, and easily automated method for colony health screening programs.

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Streamlined QbD HPLC Method Development with Automated Data Processing
Gang Xue1, Jeff Harwood1, Charles Cheng1, David Fortin1, Jian Wang1, George Reid1, Mike McBrien2, and Andrey Vazhentsev2

Quality by Design (QbD) has been widely applied to pharmaceutical manufacturing to enhance process robustness, and improve product quality and manufacturing productivity. Recently, there arose tremendous interests from both the pharmaceutical industry and regulatory agents to expand it to analytical methodology.

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Drought Induced Increase in Quercetin Glycosides is Associated with Drought Resistance in a Novel White Clover Population
Wouter L. Ballizany, Rainer W. Hofmann, Brent A. Barrett, Zulfi Jahufer

White clover is an important forage legume in temperate pastures, but does not have sufficient resistance against drought stress. Quercetin is a flavonol conferring plant sunscreen and anti-oxidant properties under UV-B stress with a trade-off of reduced biomass. An F1 full-sib cross between stress tolerant and stress sensitive white clover genotypes showed the ability to increase Q accumulation associated to maintenance of dry matter yield under a near wilting drought.

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Biopharmaceuticals Hiding in the Woods
Prof. Rodney Savidge

Suggestions are provided of how efficient industrial bioprocessing can be accomplished, independently of highly expensive molecular biology approaches, in order to recover natural products of medicinal value from wild plant species.

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Characterizing Small Molecules in Biological Extracts using IntelliXtract Data Processing on High Resolution Accurate Mass Time-of-Flight Data
Margaret Antler, Graham A. McGibbon, Vitaly Lashin, Jeffrey S. Patick and Kevin Siek

To detect small molecules in biological extracts, LC/MS performed using high resolution time of flight with accurate mass analysis is a powerful technology. Together with advanced data processing algorithms, accurate mass and relative isotope abundance measurements, molecular formulae can be determined and compounds identified.

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Showing Results 131 - 140 of 889
Scientific News
Infection Makes Mosquitoes Immune to Malaria Parasites
Study highlights the potential of using Wolbachia in malaria control.
Clues to Congenital Heart Disease
Non-inherited mutations in hundreds of genes together account for about 1 in 10 cases of severe congenital heart defects.
New DNA Cattle Test Beefs up Dairy and Meat Quality
A genomics technique developed at Cornell to improve corn can now be used to improve the quality of milk and meat.
ATARiS Informatics Platform Hits the Jackpot
ATARiS is one of several tools developed at the Broad Institute to precisely tune in to the signals within noisy datasets.
100K Pathogen Genome Project Maps First Genomes
UC project announced that it has sequenced the genomes of its first 10 infectious microorganisms, including strains of Salmonella and Listeria.
Unkempt Weedy Land Unintentionally Boosts Wildlife
Parts of the farm landscape that look overgrown and ‘scruffy’ are more important than they first appear in supporting wildlife.
New Software Spots, Isolates Cyber-attacks to Protect Networked Control Systems
Software algorithm detects and isolates cyber-attacks on networked control systems that are becoming increasingly important to national infrastructure
Computational Tool Translates Complex Data into 2-Dimensional Images
May allow doctors to track progression of cancer, response to treatment, and risk of relapse.
Program for Breakthrough Biomedical Research to Celebrate 15 Years
A program that fosters basic science projects of potentially high impact is celebrating 15 years of discovery at UC San Francisco.
Environmental Law Institute Recognizes Penn State Wetlands Scientist
Robert P. Brooks, a wetlands scientist at Penn State, has received the 2013 National Wetlands Award for Science Research.
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