Corporate Banner
Satellite Banner
Technology
Networks
Scientific Communities
 
Become a Member | Sign in
Home>Resources>White Papers>This White Paper
  White Papers
Scientific News
Shedding Light on HIV Vaccine Design
Broadly speaking - Mathematical modelling of host-pathogen coevolution sheds light on HIV vaccine design.
AACC 2016 Sees Clinical Chemistry Labs Drive Precision Medicine Offerings
Biomarker assays to enable precision medicine and risk assessment, mass spec-based tests designed for use in clinical labs large and small, and liquid biopsy technology captured the spotlight at the AACC annual meeting.
Automated Patch Clamping Trends
Learn more about current practices, preferences and metrics in ion channel drug screening using APC technology.
Lab-on-a-Stick: Miniaturised Clinical Testing For Fast Detection Of Antibiotic Resistance
A portable power-free test for the rapid detection of bacterial resistance to antibiotics has been developed by academics at Loughborough University and the University of Reading.
Genetic Ancestry of Cultivated Strawberry Unravelled
UNH scientists constructed a linkage map of the seven chromosomes of the diploid Fragaria iinumae, which allows them to fill in a piece of the genetic puzzle about the eight sets of chromosomes of the cultivated strawberry.
Progress In Vaccination Against Vespid Venom
Researchers at the Helmholtz Zentrum München and the Technical University Munich have presented a method which facilitates a personalised procedure for wasp allergy sufferers.
New Drug Target for Inflammatory Disorders
Penn study finds enigmatic molecules maintain equilibrium between fighting infection and inflammatory havoc.
Breast Cancer Cells Found To Switch Molecular Characteristics
Spontaneous interconversion between HER2-positive and HER2-negative states could contribute to progression, treatment resistance in breast cancer.
Mechanisms of Calcium Blockers
Researchers describe how the fundamental mode of action of two distinct chemical classes of calcium channel blockers differs.
Some Breast Cancer Patients With Low Genetic Risk Could Skip Chemotherapy
Genetic test can help predict survival and guide treatment options.
Scroll Up
Scroll Down

IBM eX5 Improves Next Generation Sequencing for Sanger Institute
Bookmark and Share


IBM

Life sciences and High Performance Computing(HPC) have a symbiotic relationship -- life sciences
research today relies heavily on HPC infrastructure even as HPC itself evolves rapidly to meet
newer, more demanding data analysis requirements in areas such as the Next Generation
Sequencing (NGS).

This paper presents an overview of NGS followed by key technological and computational issues related to life sciences research, with specific reference to Sanger Institute, that are addressed through IBM’s Intel based eX5 systems. Based on real scientific experiment data sourced from IBM and Sanger Institute, we highlight how IBM eX5 servers scale up and are best suited for compute and memory intensive applications such as Velvet, ABySS and SOAP. Life sciences applications benefit not only from the flexibility, dense compute capacity, 512GB-1TB memory exclusively engineered in eX5 enterprise systems for Velvet kind of applications, but also from superior I/O, memory performance and high speed interconnects coupled with IBM’s acumen for simplified cluster administration, engineering innovation for unparalleled power and energy efficiencies.

Further Information

Related Content

Lab-on-a-Chip to Detect Cancer and Diseases at the Nanoscale
IBM scientists will collaborate with the Icahn School of Medicine at Mt. Sinai to test on prostate cancer.
Wednesday, August 03, 2016
IBM, University of Calgary Collaborate
Collaboration aims to accelerate and expand advance genomic health research into common childhood conditions.
Wednesday, June 22, 2016
Watson to Gain Ability to “See” with Planned $1B Acquisition of Merge Healthcare
Deal brings Watson technology together with leader in medical images.
Friday, August 07, 2015
IBM and Mars Launch Pioneering Effort to Drive Advances in Global Food Safety
New Sequencing the Food Supply Chain Consortium to undertake the largest-ever metagenomics study and unlock food safety insights across the supply chain.
Friday, February 06, 2015
IBM’s Big Data & Analytics Monitors Babies at INFANT Centre
INFANT Centre at University College Cork to use IBM Big Data & Analytics for real time monitoring of babies in neonatal intensive care.
Tuesday, January 27, 2015
The New York Genome Center and IBM Watson Group Collaborate
Project aims to apply advanced analytics to genomic treatment options for brain cancer patients.
Wednesday, September 10, 2014
Texas A&M System Teams with IBM to Drive Computational Sciences Research through Big Data and Analytics
The collaboration will leverage the power of big data analytics and high performance computing (HPC) systems.
Monday, February 03, 2014
IBM Commits $1.2 Billion to Expand Global Cloud Footprint, Builds Massive Network
IBM is committing to significantly expand its global network of cloud data centers.
Monday, January 27, 2014
IBM and Swiss Hospital Test New Tool for Diagnosing Cancer
The compact and easy-to-use device may help unravel tumor heterogeneity and assist in personalized treatment strategies.
Thursday, October 24, 2013
IBM’s Biomedical Analytics Platform Helps Doctors Personalise Treatment
Italy’s Istituto Nazionale dei Tumori testing new decision support solutions for cancer treatments.
Tuesday, March 20, 2012
New Silicon Probe Assists in Disease Diagnostics and Drug Discovery
Scientists have developed a flexible, non-contact microfluidic probe made from silicon that can aid researchers and pathologists to investigate critical tissue samples accurately, reducing the need for large biopsy samples.
Monday, January 16, 2012
IBM Research Aims to Build Nanoscale DNA Sequencer to Help Drive Down Cost of Personalized Genetic Analysis
New advanced research effort to demonstrate a silicon-based “DNA Transistor” could help pave the way to read human DNA easily.
Thursday, October 08, 2009
IBM and University Researchers to Develop Research Tools to Improve Cancer Patient Outcomes
Advanced imaging and computer technologies aimed at providing for reliable prognosis leading to more personalized treatment.
Wednesday, February 13, 2008
IBM Discovery Could Shed Light on Workings of the Human Genome
IBM researchers discover numerous DNA patterns shared by areas of the human genome.
Wednesday, April 26, 2006
IBM Joins Forces with top Cancer Centers
IBM Collaborates with MSKCC, the Molecular Profiling Institute and Sainte-Justine Research Center.
Friday, November 11, 2005
Skyscraper Banner

Skyscraper Banner
Go to LabTube
Go to eposters
 
Access to the latest scientific news
Exclusive articles
Upload and share your posters on ePosters
Latest presentations and webinars
View a library of 1,800+ scientific and medical posters
3,300+ scientific and medical posters
A library of 2,500+ scientific videos on LabTube
4,900+ scientific videos
Close
Premium CrownJOIN TECHNOLOGY NETWORKS PREMIUM FOR FREE!