Reveal Cellular Secrets With Live-Cell Imaging
eBook
Published: September 23, 2025
Credit: Revvity
Cellular imaging is evolving beyond static snapshots, enabling researchers to visualize dynamic processes in real time.
Yet challenges such as phototoxicity, environmental stability and data management can hinder results. Hence, robust strategies are essential to capture authentic cellular behavior.
This eBook explores the advantages of live-cell imaging, the hurdles it presents and innovative solutions that support reliable, long-term assays.
Download this eBook to discover:
- The advantages of monitoring living cells in real time
- Common pitfalls in assay design and how to avoid them
- Practical strategies to improve imaging accuracy and throughput
Unlocking
cellular secrets
with live-cell
imaging.
Live-cell imaging solutions
2 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Introduction
Cellular imaging is a well-established approach to the study of cellular functions, behaviors, and
pathways to gain a deeper understanding of disease mechanisms and treatment responses. Unlike
traditional fixed-endpoint cell assays, which provide only a point-in-time snapshot of cellular
responses, live-cell imaging delivers a fuller, more realistic picture of the effects of perturbations.
Researchers can observe when and how fast something happened, i.e., the kinetics of a cellular
reaction, which helps them better understand cellular responses.
Application Typical Duration
Ca2+ flux Milliseconds
Cell migration Minutes
Protein translocation Minutes
Plasmid transfection Approx. 24h
Scratch wound Approx. 24h
Cell health & viability 1 day to a few days
Immune-cell killing 1 day to a few days
Spheroid health Several days
Stem cell monitoring Days to weeks
Live-cell imaging assays can be categorized as follows:
Diverse assays, dynamic timescales
Live-cell
end-point assay
A single image of
live cells captured
after a specified
incubation period.
Kinetic
live-cell assays
Multiple sequential
images acquired
over a time course of
hours, days, or weeks.
Fast response assays
Images captured immediately
after dispensing a compound
or modulator into wells. The
timing of image acquisition is
dependent on the known or
expected response speed,
which may be milliseconds.
Diversity of live-cell assays. Dynamic cellular
events such as proliferation, migration, movement,
signaling, apoptosis, cytotoxicity, and morphological
changes can all be studied by imaging live cells.
These dynamics occur over a broad range of
timescales.
3 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Benefits of live-cell imaging
Real-time to long-term
Cell migration: single cell tracking
Migration of live cells can be studied using
high-content imaging. Brightfield or digital
phase contrast imaging using a red LED
minimizes phototoxicity. Software tools enable
tracking of individual cells, providing kinetic
readouts such as the speed and distance
traveled. Additionally, morphological profiles
can be generated and correlated with
migration behavior, offering more detailed
insights into cellular movement patterns.
Immune-cell killing assays
Immune-cell killing assays represent a
key approach in the study of immunooncology—
the harnessing of the
immune system to combat cancer.
High-content analysis of T-cell mediated
killing of cancer cells in real-time
enables the detailed study of potential
immunotherapies, providing insights into
both the kinetics and mechanisms of
immune responses.
Calcium flux assays
Measuring the rapid influx of calcium into
the cell cytosol is important in the study
of intracellular signaling and pathological
conditions such as impaired synaptic
transmission or muscle contraction.
The very fast (milliseconds) movement
is detected in live cells using a calciumsensitive
dye and an imaging system with
“dispense and read” capability.
MILLISECONDS / SECONDS MINUTES HOURS
4 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Benefits of live-cell imaging
Six benefits of live-cell imaging
Visualization of dynamic processes and cellular
events in real-time
y Cell migration and motility (e.g., wound healing, chemotaxis)
y Organelle trafficking and dynamics
(e.g., mitochondria movement, endocytosis)
y Cell division and mitosis (e.g., tracking mitotic phases)
y Protein translocation and signaling events
(e.g., nuclear translocation of transcription factors)
1 Study of long-term processes
y Differentiation, apoptosis, or autophagy
progression over hours/days
y Interactions between live cells, such as immune
cell activity or synapse formation
4
Avoiding fixation-induced artifacts
y Depending on the type of study, it may be
beneficial to avoid fixation reagents as they could
influence the sample in an uncontrolled way or
alter protein localization
y Especially critical when studying protein
trafficking, where fixation might lead to artificial
redistribution of proteins of interest
5
Simplification of experimental workflow
y Live-cell assays are often “mix and run”, whereas
immunofluorescence staining requires multiple
washing steps between antibody incubations
6
Observation of cellular responses to
treatments over time
y Tracking responses to drugs or environmental
changes dynamically
y Monitoring transient signaling events that may be
lost during fixing
y Studying cell recovery from stress
(e.g., phototoxicity, osmotic shock)
2
Maintenance of cell viability and physiology
y Preserves physiological conditions
(e.g., pH fluctuations, ion gradients)
3
5 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Overcoming the challenges
Navigating the challenges of live-cell imaging
Maintaining cell health
Efficiency
Imaging
Environmental conditions
Data handling
Dyes and stains
Phototoxicity
Scalability & throughput
Image Quantification/
Analysis/Segmentation
6 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Overcoming the challenges
Maintaining cell health
Revvity solutions:
Maintaining cell viability and normal function throughout the duration of experiments, which may extend to several weeks, presents a major
challenge in live-cell imaging. Factors impacting cell health include:
y Environmental conditions: Temperature, CO2 concentration, and humidity should be controlled over the entire time course with minimal disruption.
y Light exposure: Prolonged exposure to excitation light can be toxic to live cells, potentially altering cellular processes.
y Imaging reagents: Dyes may be toxic to the cells over prolonged timescales or become toxic on excitation (phototoxicity), interfering with normal
cellular processes and behavior.
Environmental control
y Fluctuation-resistant environmental
control unit
Reduced light exposure
y Automated water immersion lenses
are more sensitive and allow
shortening of exposure times
y Confocal image acquisition removes
much of the light from outside the
focal plane.
Label-free high-content analysis
y Analyzes brightfield images,
avoiding the use of a fluorescent
nuclear stain.
y Identifies the cytoplasm in
AI-generated digital phase contrast
(DPC) images.
Label-free imaging
y Rapid whole well label-free analysis for cell-based assays
Non-toxic dyes
y Specifically designed for live-cell
staining
y Even in experiments lasting more
than 24 hours, cytotoxicity can
be mitigated by using appropriate
concentrations
Opera Phenix™ Plus & Operetta CLS™
high-content imaging systems
Phenologic.AI™ software
Celigo™ image cytometer
PhenoVue™ cellular imaging reagents
7 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Overcoming the challenges
Imaging and analysis of live cells
Revvity solutions:
Staining
y Stains and dyes may fade over the time-course of the assay or as cells divide (photo-bleaching)
y Background signal from culture medium may make a dye more difficult to detect than in a fixed-cell assay
Image quantification
y Brightfield images, which may be preferred for long-term experiments or cell-culture applications, are difficult to quantify due to low contrast
y Classical image analysis algorithms are optimized for fluorescent images
Analysis of Brightfield and DPC images
y Simplifies the detection of cellular nuclei in brightfield images
y Employs AI to calculate digital phase contrast (DPC) images for precise
cytoplasm identification.
y Works effectively with living cells, allowing segmentation, counting and even
tracking of cells without dyes over time.
Brightfield imaging
y Flat illumination and excellent edge-to-edge contrast allows for enhanced image quality.
Bright dyes
y Specifically designed for live-cell
staining
y Maintain brightness and high image
quality in experiments lasting more
than 24 hours
Phenologic.AI software
Celigo image cytometer
PhenoVue cellular imaging reagents
8 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Overcoming the challenges
Efficiency of live-cell assays
Revvity solutions:
Throughput limitations
y Live cell assay throughput is limited by the requirement to image the same plate multiple times.
y Rapid cellular processes (e.g., cell cycle phases) may be missed between measurement cycles because the time required for a complete plate
scan is too long.
y Maintaining cell health during transfer and imaging of multiple plates presents significant challenges.
Data handling
y Live-cell imaging with multiple time points produces a large amount of data, creating an image analysis bottleneck and storage challenges.
Fast image acquisition
y Multiple cameras for simultaneous
imaging, significantly reducing imaging
time and increasing throughput.
Fast image analysis
y >5x faster data transfer than
previous versions.
y Simultaneous image acquisition
and automated data transfer,
streamlining workflow efficiencies.
Fast image acquisition
y Routine cell-based assays, counting and imaging of individual cells in each well at high speed.
Advanced data management
y Provides very fast image analysis
and affordable data storage.
Automation
y Enables significantly higher throughput
and greater efficiency, allowing
analysis of more cells across more
plates over longer time periods.
Opera Phenix Plus
high-content imaging system
Harmony™ high-content imaging
& analysis software
Celigo image cytometer
Signals Image Artist software
Revvity robotic platforms
9 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Applications of live-cell imaging
Kinetic analysis of calcium flux activity in human iPSC-derived neurons
using the Opera Phenix Plus system.
In this study PhenoVue Cal-520 AM calcium indicator was used with fast
kinetic imaging (5 fps) to monitor spontaneous calcium signaling in single
neurons. Pharmacological interventions using Glutamate (excitatory
neurotransmitter) and Gabazine (GABA receptor antagonist) were tested.
Results showed Glutamate increased calcium response activity 9-fold in
cell bodies and 5.5-fold in neurites, while Gabazine inhibited activity up
to 4-fold.
The automated liquid handling system of the Opera Phenix Plus enabled
real-time compound addition during imaging. This approach provides
reliable quantification of neuronal
calcium dynamics, offering valuable
insights for neuroscience research and
potential drug screening applications in
neurodegenerative disease studies.
Fast kinetic calcium flux imaging using the Opera Phenix Plus highcontent
screening system.
This study demonstrates fast kinetic calcium flux imaging for GPCR analysis
using CHO-K1 cells expressing histamine H1 receptors. Cells were loaded
with Cal-520 calcium indicator and imaged at 68 fps following automated
compound addition.
For agonist testing, histamine showed dose-dependent calcium release with
an EC50 of 22 nM. In antagonist assays, pyrilamine pre-treatment inhibited
histamine-induced calcium flux with an EC50 of 117 nM. Single-cell analysis
enabled identification of subpopulations including low/high responders and
false positives. The synchronized liquid handling and high-speed imaging
(up to 100 fps) captured rapid calcium
responses occurring within milliseconds,
providing robust quantification for GPCR
drug screening applications.
Kinetic analysis
of calcium flux
activity in human
iPSC-derived neurons
using the Opera
Phenix Plus system
A P P L I CAT I O N N OT E
Abstract
The study of intracellular dynamic processes is of fundamental
importance for unraveling the mechanisms of a broad spectrum
of diseases and to develop effective drugs and therapies.
Particularly in the field of neuroscience and neurodegenerative
diseases calcium signaling is of critical importance. Calcium
ions act as second messenger molecules that elicit responses
such as neurotransmitter release from synaptic vesicles and
altered gene expression. The calcium concentration is highly
dynamic due to the presence of intracellular calcium stores
and pumps that selectively transport these ions in response
to a variety of signals.
Here we apply fast kinetic imaging using the Opera Phenix
Plus high-content screening system to visualize and evaluate
spontaneous calcium flux activity in single human iPSC-derived
neurons labeled with PhenoVue™ Cal-520 AM. Our approach
enables the assessment of calcium flux activity in single
neurons, crucial for understanding the fundamental processes
of neuronal communication and potential disruptions associated
with neurodegenerative disease or neurotoxic insults. We used
Gabazine as an antagonist of GABA(A) receptors and Glutamate
as an abundant excitatory neurotransmitter to demonstrate the
sensitivity of the assay to pharmacological interventions.1
Key features
• Fast frame rate imaging to accurately
capture rapid cellular responses
• Reliable quantification of calcium activity
in single neurons
• Measure immediate compound
responses using onboard liquid handling
Revvity application notes for live-cell imaging
10 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Applications of live-cell imaging
Revvity application notes for live-cell imaging
Label-free analysis of cardiomyocyte beating using the Opera Phenix
Plus system.
This application note demonstrates label-free analysis of cardiomyocyte
beating using the Opera Phenix Plus system with fast kinetic imaging
up to 100 fps. Human iPSC-derived cardiomyocytes were cultured
and monitored for contractility changes in response to cardiotoxic
compounds. Brightfield imaging proved non-phototoxic while maintaining
stable environmental conditions.
Testing revealed epinephrine increased beating frequency by 35% at
1 μM, ivabradine caused dose-dependent decreases, and nifedipine
completely eliminated beating at 0.005 μM. The automated liquid
handling enabled real-time compound addition during imaging.
This approach provides reliable,
scalable cardiotoxicity screening for
drug development, offering precise
quantification of compound-induced
changes in cardiomyocyte contractility
under physiological conditions.
Analysis of mitochondrial dynamics in human iPSC-derived neurons using
the Operetta CLS high-content analysis system.
This study demonstrates how the Operetta CLS system was used to
analyze mitochondrial dynamics in human iPSC-derived neurons through
fast kinetic imaging at 2 fps. Neurons were labeled with PhenoVue 551
mitochondrial stain and treated with FCCP (mitochondrial uncoupler) and
glutamate (excitatory neurotransmitter). The analysis quantified dynamic
mitochondrial fraction by subtracting adjacent time points to identify
moving mitochondria.
Results showed FCCP significantly decreased mitochondrial movement in
a dose-dependent manner, while glutamate showed no significant effect.
The gentle imaging conditions preserved mitochondrial function for up to
one hour, enabling reliable quantification
of mitochondrial dynamics crucial for
understanding neurodegeneration and
developing therapeutic interventions.
A P P L I CAT I O N N OT E
Introduction
Drug-induced cardiotoxicity is a frequent cause of drug attrition
during drug development and can lead to the withdrawal of drugs
from the market.1 In-vitro models using induced pluripotent stemcell
derived cardiomyocytes are commonly used to predict both
safety and therapeutic efficacy of drugs, chemicals, environmental
pollutants, cosmetic ingredients, or food additives.2,3 The
development of new, non-invasive approaches allowing the quick
and reliable assessment of the cardiotoxic potential of a
compound are necessary to improve drug safety.4
For research use only. Not for use in diagnostic procedures.
Label-free
analysis of
cardiomyocyte
beating using the
Opera Phenix
Plus system.
Key features
• Reliable quantification of
cardiomyocyte beating frequency
• Fast frame rate imaging up to
100 fps to accurately capture fast
cellular responses
• Tip-based on-board pipetting
compatible with 96 and 384-well plates
• Stable environmental conditions with
temperature, CO2, and humidity control
Figure 1: Opera Phenix Plus high content screening system.
11 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Applications of live-cell imaging
Automated single cell tracking using the Operetta high-content analysis
system: Analyzing chemokinesis of cancer cells.
This study demonstrates automated single cell tracking using the
Operetta system with digital phase contrast imaging to analyze cancer
cell migration. A549 lung cancer cells were stimulated with EGF and
tracked over time to measure chemokinesis.
Optimization revealed 15-minute imaging intervals and 60-minute
observation periods provided excellent Z’ factors above 0.5.
EGF showed dose-dependent migration stimulation (EC50: 2.7 ng/mL),
while AG-1478 inhibitor demonstrated dose-dependent suppression
(IC50: 1.5 μM). Morphological profiling using 45 parameters identified
distinct cell clusters correlating with
migration speed, revealing that fastmigrating
cells exhibit pronounced
membrane ruffles. This approach
enables robust quantification of
cancer cell motility for drug screening
applications.
Automated single cell tracking using the Operetta high-content analysis system: Analyzing chemokinesis of cancer cells.
Application
A549 non-small cell lung cancer cells were cultured in
F12-HAM (Sigma-Aldirch) supplied with 10% FCS and 2 mM
L-Glutamine. To perform the assay, cells were seeded in
serum-free medium at a density of 4500 cells per well
into a 384-well CellCarrier™ microplate (Revvity, 6007558)
freshly coated with 5 μg/cm² collagen I (BD Biosciences,
354236). After overnight cultivation, cell migration was
stimulated by addition of EGF (Sigma-Aldrich, E9644) at
different concentrations or by addition of 100 nM phorbol
12-myristate 13-acetate (PMA) (Sigma-Aldrich, P1585).
In the presence of 100 ng/mL EGF, the following inhibitory
compounds were tested: AG-1478 (Cayman Chemicals,
10010244), Nocodazol (Sigma-Aldrich, M1404) and
Cytochalasin D (Sigma-Aldrich, C8273).
Live cell imaging was performed using an Operetta
high-content analysis system equipped with a temperature
and CO2 control option (TCO) set to 37 °C and 5% CO2.
Directly after addition of the compounds, microplates were
placed onto the pre-heated Operetta system and incubated
for 30 min. After incubation, digital phase contrast images
were acquired at 10X magnification (10X high NA objective)
using Operetta’s automatic digital phase contrast algorithm.
Phototoxicity is minimized because digital phase imaging
uses a red light LED transmission light source. To analyze the
morphology of migrating cells in detail, we acquired digital
phase contrast images using a 20X high NA objective. Images
were acquired for up to 6 h at imaging intervals of 5-15 min.
Images were segmented using the Find Cells building block
of the Harmony software, which provides a dedicated
algorithm for segmenting digital phase contrast images.
The segmented cells were subjected to cell tracking using
the Track Objects building block. We calculated different
properties that describe cell migration either on a per time
point basis such as Current Speed or on a per cell track
basis such as Displacement. Displacement is the direct line
between the position of the first observation of a cell and
the position of the last observation of a cell. This proved to
be the most valuable readout for describing cell migration.
These optimization studies were based on a migration
experiment depicted in Figure 1, in which cells were
stimulated to migrate by a treatment with 100 ng/mL EGF.
The videos generated by the Harmony software showed
an increased cell migration after stimulation with EGF,
as indicated by the length of the cell tracks. Using this
measurement, we tested how extending the interval between
two consecutive images (imaging interval) in silico impacts on
the primary readout value cell displacement. To this end, we
considered either every time point for the analysis or only
every second, every third, every fourth, and so on (Figure 2).
We then plotted the cell displacement and the Z’ factor
against the imaging interval. As panel 2B illustrates, extending
the imaging interval beyond 15 min strongly impairs the Z’
factor due to a decrease in the cell displacement. This can
be explained by cells moving too far between two images
to be correctly tracked. Consequently, long tracks are split
into two or more shorter tracks that have a much smaller
displacement than the longer original cell track resulting in a
decreased average cell displacement per well.
Untreated
100 ng/mL EGF
Revvity application notes for live-cell imaging
Analyzing ERK signal transduction in live cells using a FRET-based ERK
biosensor on the Operetta CLS high-content analysis system.
This application note describes how a live cell FRET (Förster Resonance
Energy Transfer) assay can be automated on the Operetta CLS highcontent
analysis system to study ERK signaling. Using the EKAREV
biosensor, the researchers monitored real-time modulation of the
ERK pathway with activators and inhibitors, generating dose-response
curves with excellent assay performance (Z’ value > 0.87).
The combination of the optimized design of the EKAREV biosensor,
high-quality imaging, and intuitive Harmony software enables reliable
quantification of ERK activity. This assay supports drug discovery
efforts targeting the Ras/Raf/MEK/ERK
cascade by offering dynamic, highcontent
analysis of living cells.
A P P L I CAT I O N N OT E
Introduction
Extracellular signal-regulated kinase (ERK) is a key component
in the regulation of embryogenesis, cell differentiation, cell
proliferation and cell death.1 The ERK pathway originates
from an activated receptor in the plasma membrane and is
propagated via Ras/Raf/MEK to ERK (Figure 1). The pathway
is activated by different types of receptors, including receptor
tyrosine kinases (e.g. EGF receptor) as well as G-protein
coupled receptors.2 As the final component of the signaling
pathway, ERK phosphorylates different intracellular proteins
including a large number of other kinases and transcription
factors. The ERK signaling pathway is altered in various
cancer types and hence is being investigated as a target for
therapeutic intervention.3
Here, we describe how a live cell FRET (Förster Resonance
Energy Transfer) assay, used to study ERK signaling, can be
automated on the Operetta CLS™ high-content analysis system.
This assay concept can support the drug discovery process for
identifying signal-cascade modulating compounds.
For research use only. Not for use in diagnostic procedures.
Analyzing
ERK signal
transduction in
live cells using a
FRET-based ERK
biosensor on the
Operetta CLS
high-content
analysis system.
Key Points:
• Ratiometric high-content FRET
assay in living cells
• Quantify ERK signaling using an
EKAREV biosensor
• Study signaling cascademodulating
compounds
12 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Applications of live-cell imaging
Cytotoxicity studies on live primary human hepatocytes using the
Operetta high-content analysis system
To address the challenges of investigating drug-induced hepatotoxicity,
researchers developed a live-cell cytotoxicity assay using primary
human hepatocytes. Cryopreserved single-donor hepatocytes were
treated with three model hepatotoxins and analyzed using a no-wash
staining protocol.
Live-cell imaging was performed on the Operetta high-content analysis
system and five cellular parameters (cell count, roundness, nucleus
texture, nuclear size, and mitochondrial texture) were quantified using
Harmony software.
This high content, multiparametric
approach enables the assessment of
hepatotoxic effects, supporting rapid
toxicity profiling in a physiologically
relevant liver model.
was recorded on a standard Olympus® IX 50 microscope
with a 10X objective (10X/0.30 Ph1). After 24 hr incubation
with each compound and DMSO controls, a fluorophore
dye cocktail containing Hoechst 33342, BOBO™-3 and
MitoTracker® Deep Red (Invitrogen, H3570, M22426, B3586)
for quantification of the nuclear size and staining pattern
(texture). The use of MitoTracker® Deep Red enabled the
detection of the cell shape and was also used to evaluate
the cell roundness, as well as the distribution and quantity of
Figure 1: Left. 10X phase contrast image of human primary hepatocytes seeded on collagen-coated 384-well CellCarrier™ microplates in a
conventional monolayer, after thawing, overnight attachment and one wash step. The majority of the cells adhered and adopted a polygonal
shape with a highly granulated cytoplasm; several binuclear cells could be observed. Most primary hepatocytes survived the thawing
procedure, leaving few cells detached and rounded.
Basal phenotype before drug treatment 100 μM Tacrine
Control
3 μM FCCP
3 μM FCCP
Revvity application notes for live-cell imaging
13 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Applications of live-cell imaging
Live-cell assays with Revvity’s
high-content imaging systems
Viability analysis and high-content live-cell
imaging for drug testing in prostate cancer
xenograft-derived organoids.
Van Hemelryk A, et al. Cells. 2023, 12(10), 1377
Van Hemelryk and colleagues created an
optimized live-cell imaging workflow for
drug testing in prostate cancer xenograftderived
organoids using the Opera Phenix
high-content screening system, enabling
high-resolution visualization of organoids
and quantification of cell death modalities to
distinguish cytostatic from cytotoxic effects
at the single-organoid level.
High-throughput measure of mitochondrial
superoxide levels as a marker of coronary
artery disease to accelerate drug translation
in patient-derived endothelial cells using
Opera Phenix technology.
Lee WE, et al. Int. J. Mol. Sci. 2024, 25(1), 22
Lee and colleagues used the Opera
Phenix high-content screening system and
Harmony software to measure mitochondrial
superoxide (mROS), membrane potential,
and mitochondrial area in patient-derived
endothelial colony-forming cells, revealing
elevated mROS in coronary artery disease
cells versus healthy controls and identifying a
receptor antagonist that reduced mROS.
Pancreatic cancer organoids in the
field of precision medicine: A review
of literature and experience on drug
sensitivity testing with multiple readouts
and synergy scoring.
Mäkinen L, et al. Cancers. 2022, 14(3), 525
Mäkinen and colleagues used the Opera
Phenix system with Harmony software
to study drug sensitivity in pancreatic
cancer organoids, finding that some
treatments reduced viability without
causing cell death and tracking individual
nuclei to reveal surviving cells after
potent drug combinations, demonstrating
the platform’s utility for uncovering
mechanisms of resistance.
REVVITY IN THE RESEARCH SPOTLIGHT
14 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Applications of live-cell imaging
Live-cell assays with Revvity’s
Celigo image cytometer
MCM8 promotes gastric cancer progression through RPS15A and
predicts poor prognosis
Ding L, et al. Cancer Medicine. 2024;13(13).
Minichromosome maintenance protein family member 8 (MCM8) is an
oncogene that predicts poor prognosis in gastric cancer (GC) patients.
Knockdown experiments identified RPS15A as a downstream target
of MCM8. Cell proliferation was evaluated using the Celigo image
cytometer following MCM8 and RPS15A knockdown.
High-throughput SARS-CoV-2 antiviral testing method using the Celigo
Image Cytometer
St Clair LA, et al. J Fluoresc 34, 561–570 (2024)
A high-throughput screening method was developed using the Celigo
image cytometer to rapidly evaluate drug candidate efficacy against
SARS-CoV-2 infectivity. This approach also assessed drug cytotoxicity,
providing a rapid alternative to plaque reduction assays for pandemic
response.
Measuring apoptotic effects of EP4A1 and EP4A2 on Kuramochi with a
high-throughput multiplex image cytometric method
McDonald J, et al. Cancer Research. 2024;84(6_Supplement):5930.
A multiplexed apoptosis detection method was developed using the
Celigo image cytometer to investigate the apoptotic effects of EP4A1,
EP4A2, Paclitaxel, and Carboplatin on Kuramochi ovarian cancer cells.
Multiplex staining enabled simultaneous assessment of early apoptosis,
late apoptosis, and necrosis in a high-throughput format.
Comparison of CAR-T cell-mediated cytotoxicity assays with
suspension tumor cells using high-throughput plate-based image
cytometry method
Chan LLY, et al. Cancer Research. 2023;83(7_Supplement):5326.
The Celigo image cytometer was used to evaluate and compare two
CAR T-cell-mediated cytotoxicity assays using GFP-expressing versus
fluorescent dye-labeled myeloma and plasmacytoma cells. Analyses
demonstrated that the GFP-based method provided higher sensitivity for
detecting cytotoxicity levels compared to CMFDA/DAPI viability staining.
REVVITY IN THE RESEARCH SPOTLIGHT
15 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Revvity solutions for live-cell imaging
The PhenoVue live cell painting kit allows for multiplexed labeling of live cells using four fluorescent
probes staining nuclei, mitochondria, microtubules, and intracellular vesicles. Designed for use in
live-cell imaging workflows, the kit supports time-lapse acquisition to monitor phenotypic changes
over time in response to chemical or genetic treatments.
The probes are compatible with standard cell culture conditions and have been optimized to exert
minimal impact on cell viability and proliferation, for reliable results even during extended imaging.
By streamlining the staining workflow, the PhenoVue
live cell painting kit reduces hands-on time and
experimental variability to support the delivery of
high-quality, reproducible data.
Key features:
y 4-Plex staining: Simultaneous visualization of nuclei, mitochondria, microtubules,
and intracellular vesicles.
y Time-lapse compatible: supports long-term imaging without perturbing cells.
y Preserves proliferation and viability: Little impact on cell growth and health
confirmed across multiple cell lines.
y No-wash, straightforward protocol: Simple workflow that reduces handling and
preserves live-cell conditions
PhenoVue live-cell painting kit
PhenoVue live-cell painting kit
Time-lapse imaging of untreated U20S
cells. Image acquisition every 8h for 72h
on the Opera Phenix Plus high-content
screening system.
PhenoVue live-cell painting kits
y Kit for 2 x 96-well plates
y Kit for 10 x 96-well plates
16 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Revvity solutions for live-cell imaging
Non-toxic PhenoVue live-cell stains are designed for detection of cell organelles, such as lysosomes, actin,
and tubulin, in live cell assays. They offer bright and stable fluorescence (no photobleaching), a no-wash
assay protocol, and have no observed effect on cell health or proliferation.
PhenoVue live-cell stains
PhenoVue Fluor 647
live-cell actin stain
Time-lapse imaging of untreated U20S
cells. Image acquisition every 15 min for
15h on the Opera Phenix Plus system.
PhenoVue live-cell stains
y PhenoVue Fluor 647 live-cell actin stain
y PhenoVue Fluor 555 live-cell tubulin stain
y PhenoVue Fluor 647 live-cell tubulin stain
PhenoVue Fluor 555
live-cell tubulin stain
Time-lapse imaging of untreated U20S
cells. Image acquisition every 2h for 24h
on the Opera Phenix Plus system.
17 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Revvity solutions for live-cell imaging
PhenoVue cellular imaging reagents
Revvity’s PhenoVue portfolio includes organelle and cell compartment stains, and cell function reagents many of
which are compatible with live-cell imaging. Benefits of PhenoVue cellular imaging reagents include: straightforward
protocols for ease-of-use, performance demonstrated in biological and pharmacological models, extensive testing
to provide optimal formulations and long-term stability and stringent QC for batch-to-batch reproducibility.
Cell function reagents and kits
y PhenoVue ROS total oxidative stress indicators: ROS-490, ROS-570,
and ROS-670
y PhenoVue fluorescent calcium indicators: Cal-520 AM, Cal-590 AM, Cal-520
AM Bright, Cal-590 AM Bright, and Fluo-4 AM
y PhenoVue 505 live cell caspase-3/7 activity stain: a no-wash and cellpermeable
fluorogenic dye for visualizing apoptotic cells.
y PhenoVue live/dead cell viability assay kit: a two-color green/red fluorescence
method for the simultaneous determination of live and dead cells.
y PhenoVue HypoxiTRAK™: a cell-permeable hypoxia indicator, which exhibits
far-red fluorescence.
PhenoVue organelle and cell compartment stains
y PhenoVue Fluor-Concanavalin A conjugates
y PhenoVue Fluor-WGA conjugates
y PhenoVue Fluor Lysosomal stains
y PhenoVue Fluor Mitochondrial stains
y PhenoVue Fluor 493 lipid stain
y PhenoVue Nile Red lipid stain
y PhenoVue Fluor 512 nucleic acid stain
y PhenoVue Hoechst 33342 nuclear stain
y PhenoVue DRAQ5™
Time-lapse imaging of U2OS cells stained with PhenoVue
505 live cell caspase-3/7 activity stain in the presence of
staurosporine. Images acquired on the Opera Phenix Plus
high-content screening system every 5 min for 24 hours.
HeLa cells stained with PhenoVue Hoechst
33342 and PhenoVue 503 Lysosomal stain.
Imaged on the Operetta CLS high-content
analysis system.
18 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Revvity solutions for live-cell imaging
From basic research to assay development and screening, Revvity’s high-content imaging systems produce amazing
images, so you can take your research further – and make discoveries faster. Both Operetta CLS and Opera Phenix Plus
are confocal spinning disk systems, providing gentle imaging with efficient background rejection.
y Reduce exposure times with water
immersion lenses that improve sensitivity
and resolution in XY and Z dimensions, while
confocal image acquisition removes much
of the light from outside the focal plane.
y Maintain optimal cell health with
environmental control options for assays
running from hours to days.
y Analyze live cells gently using label-free
digital-phase contrast imaging mode or
brightfield imaging.
y Perform fast response live-cell assays with
dispensing options and fast frame-rate
imaging on the Opera Phenix Plus system.
Opera Phenix Plus and Operetta CLS
high-content imaging systems
Opera Phenix Plus high-content
screening system
Operetta CLS high-content
analysis system
19 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Revvity solutions for live-cell imaging
The Phenologic.AI module in Harmony and Signals Image Artist™ software harnesses the
power of pretrained deep neural networks (DNNs) to provide an efficient and reliable
method for identifying cells and cellular nuclei within fluorescent and brightfield images.
y Turnkey AI image analysis: Utilize pre-trained AI for easy and efficient
analysis of both fluorescent and brightfield images, without re-training by
the scientist
y Label-free detection: Simplifies detection of cellular nuclei in brightfield
images without nuclear staining, saving sample preparation time
y Robust identification: Trained on diverse cell lines to reliably identify
cellular structures and provides phase contrast imaging for cytoplasm
segmentation
y Increase multiplexing capabilities: Enhance your experimental flexibility
and use more fluorescent dyes with additional markers
y Improved viability: Reduce phototoxicity for live-cell experiments by
avoiding stress from fluorescent dyes, improving cell viability
Phenologic.AI for cellular image analysis
Phenologic.AI
Time-lapse imaging of MCF7 cells. Brightfield image
acquisition every 4 min for 24h on the Opera Phenix
Plus system (20x air objective).
Phenologic.AI: Nuclei segmentation on brightfield images using
a pre-trained Artificial Intelligence (AI) model
• Trained on diverse cell line images with varied objectives
• Robust segmentation of cells on brightfield images
• Pre-trained AI model for multiple magnifications and cell types
• Digital phase reconstruction for cytoplasm segmentation
20 |
• Introduction
• Contact us
• Benefits of
live-cell imaging
• Overcoming the
challenges
• Revvity solutions for
live-cell imaging
• Applications of
live-cell imaging
For research use only.
Not for use in diagnostic procedures.
Revvity solutions for live-cell imaging
The Celigo image cytometer performs live-cell kinetic analysis and cell sample characterization,
prior to downstream processing.
y Detect, image, and count individual cells in each well
y Analyze at the cell level for applications such as: apoptosis, cell cycle, fluorescent reporters,
and cytotoxicity
y Label-free proliferation
y Rapid whole well imaging to help maintain cell health outside the incubator
y Automated microplate handling option for kinetic end-point analysis or time-point analysis
Assays and applications:
y Cell survival
y Cytoxicity
y Proliferation
Celigo image cytometer
Celigo image cytometer
y Growth curves
y Dose response
y Cell line expansion
y 2D/3D growth inhibition
y Tumor spheroid formation
Brightfield image of counted cell colonies
across a well in a 96-well plate.
Brightfield image of the edge of a well in a 96-well plate
showing enhanced image quality and contrast.
Brightfield image of counted
adherent cells in one well of
a 96-well plate.
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