Researchers have identified a pattern of gene activity in mice that may help to predict individual risk for breast cancer metastasis and survival in humans. A single gene, called "bromodomain 4 (Brd4)", regulates the expression of this pattern, also called a signature.
The researchers found that one result of this "Brd4" regulation is the suppression of tumor growth and metastasis in a mouse model of cancer. These findings, published by researchers at the National Cancer Institute (NCI) and the Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD), parts of the National Institutes of Health, appear in the April 29, 2008, issue of the "Proceedings of the National Academy of Sciences".
"Theses findings are exciting," said Kent W. Hunter, Ph.D., of NCI's Center for Cancer Research. "For the first time in mice, we have a candidate gene for what drives an entire gene signature. This should allow a better understanding of the mechanisms underlying cancer progression in humans."
Normal "Brd4" activity is involved in important cell processes, including cell proliferation, cell cycle progression, and DNA replication. Defects in the processes related to "Brd4" activity are well documented in breast cancer in humans. It is known that the "Brd4" protein physically interacts with and regulates the activity of another important gene, called "Sipa1", which reduces tumor invasiveness in mice.
The researchers began their search for the "Brd4"-induced gene signature by engineering highly metastatic mouse mammary tumor cells that expressed "Brd4". They found that "Brd4"-expressing cells were less invasive and less mobile in laboratory experiments than non-"Brd4"-expressing cells, yet showed no change in their rate of growth.
Next, they implanted their metastatic "Brd4"-expressing cells into mice. For comparison, they engineered and implanted some of the same metastatic cells so that an unrelated control gene was expressed. After 4 weeks, the researchers found that "Brd4"-expressing metastatic cells seemed to suppress both tumor growth and metastasis. This group of mice had dramatically smaller tumors and had fewer metastatic tumors in their lungs compared to the mice in the control group. Overall, these findings appear to indicate that activation of "Brd4" reduces tumor growth by influencing the response of tumor cells to signals from the microenvironment -- the area immediately surrounding the tumor -- that promote both tumor growth and metastasis.
Taking the knowledge gained from their mouse models of metastasis, the researchers' turned to examine human gene signatures identified from microarray data from the National Center for Biotechnology Information (NCBI) Gene Expression Omnibus and Rosetta Informatics. Microarray techniques allow researchers to examine the activity of thousands of genes simultaneously.
Hunter's team identified a set of 379 genes in humans that are similar to the genes affected by "Brd4" expression in the mouse model. They found that the level of activation of "Brd4" or "Brd4"-associated pathways within a tumor were an important determinant of relapse and survival. "Brd4" seemed to drive the expression of many of the genes present in the signature.
Using the "Brd4" gene signature, the researchers were able to predict survival and relapse of breast cancer patients in five separate datasets. They were also able to predict the survival of subsets of patients whose breast cancer had not spread to their lymph nodes and patients with estrogen-receptor positive tumors. Estrogen is known to play an important role in the development of breast cancer and about 70 percent of all breast cancers are estrogen-receptor positive. Further research is needed to determine the exact role of "Brd4" in the progression of breast cancer, noted Hunter.