We've updated our Privacy Policy to make it clearer how we use your personal data.

We use cookies to provide you with a better experience. You can read our Cookie Policy here.


Refining optogenetic methods to map synaptic connections in the brain

Refining optogenetic methods to map synaptic connections in the brain content piece image
Listen with
Register for free to listen to this article
Thank you. Listen to this article using the player above.

Want to listen to this article for FREE?

Complete the form below to unlock access to ALL audio articles.

Read time: 2 minutes

Optimizing optogenetic methods for circuit mapping is enabling measurements of functional synaptic connectivity with single neuron resolution -

A fundamental question in neuroscience is how neuronal networks and circuits give rise to brain function, as disruptions in these connections can lead to mental illness and brain disorders. With the development of optogenetics, researchers can study the function of specific neurons by turning them on and off with light under various conditions.

See Also: New mapping approach lets scientists zoom in and out as the brain processes sound

Translating the rules governing the functional organization of neural circuits requires knowledge of the synaptic connections among identified classes of neurons as well as the strength and dynamics of these connections. Researchers from Max Planck Florida Institute for Neuroscience (MPFI) optimized optogenetics to map the neural circuits of the brain of rodents with single neuron resolution.

Turning on and off neural circuits

Optogenetics is a technique that combines genetics and optics to control neuronal activity, which is based on the discovery of light-sensitive membrane channels within pond algae that control movement in response to light. When genes that produce one such light-sensitive membrane channel, called channelrhodopsin (ChR), are inserted into neurons and subsequently exposed to light, they regulate the flow of ions across cell membranes, increasing the neuron's activity. This allows scientists to discretely control neuronal activity by using pulses of light to activate specific populations of neurons.

Read Next: New brain mapping reveals unknown cell types

Optogenetics is leveraged for mapping connections in the brain by stimulating individual neurons with light and recording the responses of nearby neurons with an electrode. In this manner, scientists ask whether stimulation of a putative presynaptic neuron causes a response in the putative postsynaptic neuron being monitored by the electrode. When ChRs are inserted into neurons using genetic techniques, however, their expression occurs throughout the entire surface of the neuron, from dendrites, the parts of the neuron that receive information, to the axon, the part of the neuron that sends information. The fact that ChR expression is not restricted to one particular domain of the neuron limits the information researchers can collect and interpret about synaptic connectivity, since it can be difficult to determine whether ChR stimulation was generated in a protein located in that neuron's cell body, or in the axon terminal or in the dendrites of other cells that happen to be passing through the light-stimulated area.

Published in eLife, the researchers which include Christopher Baker, PhD and McLean Bolton, PhD both from MPFI, described how they optimize optogenetic methods for mapping neural circuits in the brain. Their improved method uses optical techniques to confine light stimulation to a defined disc-like shape deep within living tissue, combined with a genetic approach for spatial restriction of ChR expression to the cell body and proximal dendrites of neurons. The spatially restricted ChR expression allows unmasking of synaptic connections from neurons whose cell bodies lie close to the dendrites of the postsynaptic cell that would have been occluded by direct activation of ChR on its dendrites. Moreover, it ensures that when light stimulation is applied to a particular cell, any recorded responses can reliably be assigned to the activity of that cell and not to the stimulation of axons or dendrites of other cells that happen to be passing within the disc of light stimulation. This method is a reliable way to rapidly evaluate synaptic connectivity with single neuron resolution and also offers enhanced specificity for other experiments involving optogenetic manipulations.

Future directions

Learn More: Mapping neurons to improve the treatment of Parkinson's

According to Dr. Bolton, their goal is to construct precise maps revealing the functional connectivity of synapses, without the loss of information that limits the current optogenetics method. Evaluating neural circuits through optical stimulation promises to reveal much about how the nervous system functions, how it is modified by experience, and how it is disturbed in animal models of neurologic or psychiatric disease. "This optimized method is straightforward and easy to implement with standard two-photon microscopy, opening up many possibilities in research not only at MPFI but also for the entire field of neuroscience", said Dr. Bolton.

Note: Material may have been edited for length and content. For further information, please contact the cited source.

Max Planck Florida Institute for Neuroscience   press release


Baker CA et al. Cellular resolution circuit mapping in mouse brain with temporal-focused excitation of soma-targeted channelrhodopsin.   eLife, Published August 15 2016. doi: 10.7554/eLife.14193