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RNA-Seq – News and Features

News

Agilent Debuts RNA Target Enrichment, Streamlining Transcriptome Profiling Studies to Advance Cancer and Stem Cell Research

Company has introduced SureSelect RNA Capture Kits, enabling geneticists to focus on specific genomic loci or transcripts of research interest.
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Researchers believe EMT is the Dominant Program in Human Colon Cancer

Traditionally Colon Cancer has long been thought of as heterogeneous, therefore making it difficult to identify unifying molecular hypotheses explaining the biology and behavior of the disease. To help combat this problem researchers at Merck have attempted to uncover unbiased, native biological traits that might underpin colon cancer.
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Biogemma Chooses TIBCO Spotfire as a Key Component of its Global Genetic Research Data Management Tool

After using DecisionSite for six years, Biogemma selects the latest version of TIBCO Spotfire to improve the quality of its genomics analyses.
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University of Florida, 454 Life Sciences and the DOE JGI Sequence Sweet Orange Genome

Researchers from the International Citrus Genomics Consortium announced this weekend at the Plant and Animal Genome (PAG) XIX conference in San Diego, California the availability of the sequence assembly and annotation of the first citrus genomes, the sweet orange (Citrus sinensis) and the Clementine mandarin (Citrus clementina).
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Strand-specific Transcriptome Profiling with Directly Labeled RNA

Researchers at the Forsythe Institute and the University of Boston have developed an effective method using directly labelled RNA in hybridized microarrays to map transcriptome profiles specific to both coding strands of a bacterial genome.
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Metabolomic Biomarker Research for the Early Detection of Diabetes

International expert meeting on the current status, benefits, and opportunities of metabolomics in the nutritional sciences, diabetes research, and endocrinology.
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Novel Polyadenylation Genome-wide Profiling Achieved using Next Generation Sequencing Software

A paper published in the journal Cell highlighting a novel genome wide profile of polyadenylation events in human and yeast, performed with Direct RNA Sequencing, demonstrated the importance of appropriate bioinformatics software in maximizing the value of the genomic data.
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Biogemma, GenomeQuest, and SGI Create First High-Performance Computing Solution Deployed for Agriculture Genomics

Biogemma, GenomeQuest, and SGI today announced a collaboration that has resulted in the first high-performance computing solution deployed for agriculture genomics.
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The Developmental Dynamics of the Maize Leaf Transcriptome

The study, using the agronomically critical maize (corn) plant as a model, tracks through massive sequencing of gene transcripts, the full complement of expressed genes in a corn leaf. The researchers found that as the leaf develops, entire suites of genes are turned on and off.
News

NIH Launches Genotype-Tissue Expression Project

Project to chart influence of DNA changes on gene function in human tissues and organs.
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